diff --git a/glicid/packages/glicid.scm b/glicid/packages/glicid.scm index 7067fa6..1380bb8 100644 --- a/glicid/packages/glicid.scm +++ b/glicid/packages/glicid.scm @@ -142,23 +142,6 @@ ) ) -;(define-public glicid-gromacs-openmpi -; (package -; (inherit gromacs) -; (name "glicid-gromacs-openmpi") -; (inputs `(("openmpi", openmpi) -; ,@(package-inputs gromacs))) -; (build-system cmake-build-system) -; (arguments -; `(#:configure-flags configure-flags) -; (append configure-flags (list "-DGMX_MPI=on" -; "-DCMAKE_C_COMPILER=mpicc" -; "-DCMAKE_CXX_COMPILER=mpiicxx" -; )) -; ) -; ) -;) - (define-public glicid-gromacs-openmpi (package @@ -257,49 +240,6 @@ ) ) -;(define-public glicid-specific-hdf5-parallel-openmpi -; (package/inherit glicid-specific-hdf5 ;use the latest -; (name "glicid-specific-hdf5-parallel-openmpi") -; (inputs -; `(("mpi" ,glicid-specific-openmpi) -; ,@(package-inputs glicid-specific-hdf5))) -; (arguments -; -;; `( -;; #:tests? #f -; -; ( -; substitute-keyword-arguments (package-arguments glicid-specific-hdf5) -; ((#:configure-flags flags) -; ``("--enable-parallel" "--disable-tests" -; ,@(delete "--enable-cxx" -; (delete "--enable-threadsafe" ,flags)))) -; ((#:phases phases) -; `(modify-phases ,phases -; (add-after 'build 'mpi-setup -; ,%openmpi-setup) -; (add-before 'check 'patch-tests -; (lambda _ -; ;; OpenMPI's mpirun will exit with non-zero status if it -; ;; detects an "abnormal termination", i.e. any process not -; ;; calling MPI_Finalize(). Since the test is explicitly -; ;; avoiding MPI_Finalize so as not to have at_exit and thus -; ;; H5C_flush_cache from being called, mpirun will always -; ;; complain, so turn this test off. -; (substitute* "testpar/Makefile" -; (("(^TEST_PROG_PARA.*)t_pflush1(.*)" front back) -; (string-append front back "\n"))) -; (substitute* "tools/test/h5diff/testph5diff.sh" -; (("/bin/sh") (which "sh"))) -; #t)))) -; -;)) -; -; -; -; (synopsis "Management suite for data with parallel IO support"))) -; - (define-public glicid-motif (package